DNA Binding Motif

						

			
Accessions: 1le5_E (3D-footprint 20231221)

			
Names: Nuclear factor NF-kappa-B p65 subunit
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of a NF-kB heterodimer bound to an IFNb-kB
Length: 4
Consensus: tTCC
Weblogo: 
PSSM: P0      A      C      G      T
01     19     18     17     42      t
02     10      7      6     73      T
03      0     93      1      2      C
04      0     96      0      0      C
Binding TFs: 1le5_E (Rel homology domain (RHD))
Binding Sites: 1le5_G
1le5_H
			
Publications: Berkowitz B, Huang D.B, Chen-Park F.E, Sigler P.B, Ghosh G. The x-ray crystal structure of the NF-kappa B p50.p65 heterodimer bound to the interferon beta -kappa B site. The Journal of biological chemistry 277:24694-700 (2002). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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