DNA Binding Motif

						

			
Accessions: ZIC5_methyl_1 (HT-SELEX2 May2017)

			
Names: ZIC5
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 16
Consensus: rgACCCCCyGCTGTGm
Weblogo: 
PSSM: P0      A      C      G      T
01  17887  10819  16090   8752      r
02   1212   5728  42870  13730      g
03  47310   4407  11047     24      A
04   1596  53270      3     61      C
05    448  53356     10    219      C
06   4624  49609    106   1233      C
07      7  53546      2      3      C
08    583  53181      6      5      C
09     26  20948      0  32597      y
10   8933     30  49970     58      G
11      0  53108    175   2157      C
12    775   3264   9070  48224      T
13     23      3  53528      6      G
14   8656    961   2672  48925      T
15      0    451  51708   4169      G
16  25340  24971    928   8516      m
Binding TFs: ZIC5 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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