DNA Binding Motif

						

			
Accessions: UN0403.1 (JASPAR 2024)

			
Names: JGL
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 11
Consensus: AmytyCAGTTm
Weblogo: 
PSSM: P0      A      C      G      T
01    853     25 81.667     40      A
02    415    427    108     50      m
03 36.667    458  6.667    498      y
04    207     40    190    563      t
05    115    267    237    382      y
06 13.333    815 86.667     85      C
07    963  6.667     30      0      A
08      0 11.667    988      0      G
09  6.667      0      0    993      T
10  3.333 46.667 26.667    923      T
11    397    313 78.333    212      m
Type: Heterodimer
Binding TFs: Q6S592
Q6S592
			
	
			


			

				

				
				
				
				

			

			

		

	
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