DNA Binding Motif

						

			
Accessions: 5ciz_AB (3D-footprint 20231221)

			
Names: cAMP-activated global transcriptional regulator CRP
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: E. coli RNA polymerase alpha subunit CTD in complex with CAP and DNA: A(5)-tract binding site for alpha CTD
Length: 5
Consensus: TCacA
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0     96      T
02      0     96      0      0      C
03     57     13     13     13      a
04     13     54     16     13      c
05     96      0      0      0      A
Binding TFs: 5ciz_A (Cyclic nucleotide-binding domain, Bacterial regulatory proteins, crp family, Crp-like helix-turn-helix domain)
Binding Sites: 5ciz_D
5ciz_E
			
	
			


			

				

				
				
				
				

			

			

		

	
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