DNA Binding Motif

Accessions: 4j19_B (3D-footprint 20231221)
Names: Homeobox-containing protein 1
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of a novel telomere repeat binding protein bound to DNA
Length: 6
Consensus: CTAACC
01 8 80 8 0 C
02 8 8 8 72 T
03 72 8 8 8 A
04 72 8 8 8 A
05 0 96 0 0 C
06 0 96 0 0 C
Binding TFs: 4j19_B (Homeobox domain, Homeobox KN domain)
Binding Sites: 4j19_C
Publications: Kappei D, Butter F, Benda C, Scheibe M, Draškovič I, Stevense M, Novo C.L, Basquin C, Araki M, Araki K, Krastev D.B, Kittler R, Jessberger R, Londoño-Vallejo J.A, Mann M, Buchholz F. HOT1 is a mammalian direct telomere repeat-binding protein contributing to telomerase recruitment. The EMBO journal 32:1681-701 (2013). [Pubmed]

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