DNA Binding Motif

						

			
Accessions: 4j19_B (3D-footprint 20231221)

			
Names: Homeobox-containing protein 1
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of a novel telomere repeat binding protein bound to DNA
Length: 6
Consensus: CTAACC
Weblogo: 
PSSM: P0      A      C      G      T
01      8     80      8      0      C
02      8      8      8     72      T
03     72      8      8      8      A
04     72      8      8      8      A
05      0     96      0      0      C
06      0     96      0      0      C
Binding TFs: 4j19_B (Homeobox domain, Homeobox KN domain)
Binding Sites: 4j19_C
4j19_D
			
Publications: Kappei D, Butter F, Benda C, Scheibe M, Draškovič I, Stevense M, Novo C.L, Basquin C, Araki M, Araki K, Krastev D.B, Kittler R, Jessberger R, Londoño-Vallejo J.A, Mann M, Buchholz F. HOT1 is a mammalian direct telomere repeat-binding protein contributing to telomerase recruitment. The EMBO journal 32:1681-701 (2013). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.