DNA Binding Motif

						

			
Accessions: M0326 (AthalianaCistrome v4_May2016)

			
Names: STOP1.ampDAP, T01065;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: aCCTtCmCCRGwTra
Weblogo: 
PSSM: P0      A      C      G      T
01    374     47    110     48      a
02     72    458     29     20      C
03      0    535      1     43      C
04     33     41     80    425      T
05    100    144    131    204      t
06     70    440     26     43      C
07    260    282      6     31      m
08      1    473      0    105      C
09     43    405     21    110      C
10    395      4    155     25      R
11     90     33    407     49      G
12    308     32     71    168      w
13    125     34     10    410      T
14    314     79    157     29      r
15    221    141     73    144      a
Binding TFs: T01065 (Zinc finger, C2H2 type)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.