DNA Binding Motif
| Accessions: | MA1698.1 (JASPAR 2024) |
| Names: | ARF7 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 14 |
| Consensus: | acwGCCGACrAGgt |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1740 1003 752 570 a 02 775 1727 745 818 c 03 1321 502 463 1779 w 04 251 317 3325 172 G 05 113 3717 135 100 C 06 141 3801 64 59 C 07 83 120 3799 63 G 08 3801 46 176 42 A 09 18 3917 76 54 C 10 2657 173 1196 39 r 11 3150 457 229 229 A 12 419 529 2904 213 G 13 771 970 1756 568 g 14 798 1001 735 1531 t |
| Type: | Heterodimer |
| Binding TFs: | D9HNT4 (AUX/IAA family, B3 DNA binding domain, Auxin response factor) D9HNT4 |
| Binding Sites: | MA1698.1.2 / MA1698.1.5 MA1698.1.18 MA1698.1.1 MA1698.1.10 MA1698.1.11 MA1698.1.12 / MA1698.1.14 MA1698.1.13 MA1698.1.15 MA1698.1.16 MA1698.1.17 MA1698.1.19 / MA1698.1.5 MA1698.1.2 / MA1698.1.6 MA1698.1.20 / MA1698.1.6 MA1698.1.1 / MA1698.1.3 MA1698.1.4 MA1698.1.3 / MA1698.1.7 MA1698.1.8 MA1698.1.4 / MA1698.1.9 MA1698.1.10 MA1698.1.11 / MA1698.1.16 / MA1698.1.8 MA1698.1.12 / MA1698.1.9 MA1698.1.13 MA1698.1.14 MA1698.1.15 MA1698.1.17 MA1698.1.18 MA1698.1.19 MA1698.1.20 MA1698.1.7 |
| Publications: | Boer D.R, Freire-Rios A, van den Berg W.A, Saaki T, Manfield I.W, Kepinski S, López-Vidrieo I, Franco-Zorrilla J.M, de Vries S.C, Solano R, Weijers D, Coll M. Structural basis for DNA binding specificity by the auxin-dependent ARF transcription factors. Cell 156:577-89 (2014). [Pubmed] |
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