DNA Binding Motif

						

			
Accessions: HOXB13_3 (HT-SELEX2 May2017)

			
Names: HOXB13
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: cCCmATAAAAc
Weblogo: 
PSSM: P0      A      C      G      T
01    849   1730    776    509      c
02    250   3864    845    297      C
03     34   3864      0    313      C
04   3864   1679     18    546      m
05   3864      0     16      9      A
06      0      0      0   3864      T
07   3864      0      0     60      A
08   3864      0      0      3      A
09   3864      0      5      0      A
10   3864    782    174    360      A
11    650   2023    327    864      c
Binding TFs: HOXB13 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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