DNA Binding Motif
| Accessions: | UN0354.1 (JASPAR 2024) |
| Names: | AT3G42860 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 12 |
| Consensus: | aaAGTCAACgwh |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 626 198 199 264 a 02 804 100 170 213 a 03 1072 26 166 23 A 04 9 6 1268 4 G 05 0 2 2 1283 T 06 10 1271 1 5 C 07 1277 5 2 3 A 08 1279 1 3 4 A 09 66 1136 6 79 C 10 122 114 871 180 g 11 339 305 301 342 w 12 334 357 165 431 h |
| Type: | Heterodimer |
| Binding TFs: | Q9M1L9 (Zinc knuckle, GRF zinc finger, Zinc knuckle) Q9M1L9 |
| Binding Sites: | UN0354.1.1 UN0354.1.10 / UN0354.1.9 UN0354.1.10 / UN0354.1.11 / UN0354.1.12 / UN0354.1.13 / UN0354.1.3 UN0354.1.11 / UN0354.1.12 UN0354.1.13 / UN0354.1.14 UN0354.1.14 / UN0354.1.15 UN0354.1.15 / UN0354.1.16 UN0354.1.16 / UN0354.1.17 UN0354.1.18 UN0354.1.17 / UN0354.1.19 UN0354.1.2 UN0354.1.18 / UN0354.1.20 UN0354.1.4 UN0354.1.5 UN0354.1.6 UN0354.1.6 / UN0354.1.7 UN0354.1.7 / UN0354.1.8 UN0354.1.8 / UN0354.1.9 UN0354.1.19 UN0354.1.20 |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.