DNA Binding Motif

						

			
Accessions: TBX1_DBD_1 (HumanTF 1.0)

			
Names: TBX1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 20
Consensus: AgGTGTGAAAaaAgGTGTGA
Weblogo: 
PSSM: P0      A      C      G      T
01   6790     23    978   1855      A
02   1576   1003   6165    925      g
03      9      4   7564     26      G
04      9    113     64   7491      T
05      7     11   7557     15      G
06     58    414     37   7446      T
07     26    252   5703   1968      G
08   7584      7      5      0      A
09   7308     30    933    433      A
10   7158    349    937   1116      A
11   6258    671    830   2520      a
12   6787   1566   1036   1724      a
13   7379      3    302    239      A
14   1978    914   6353   1298      g
15      8     12   7526     49      G
16    392    416     31   7267      T
17      5      0   7581      0      G
18    353    299     18   7570      T
19     54    173   7545   1622      G
20   7565     26     32      7      A
Binding TFs: TBX1_DBD (T-box)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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