DNA Binding Motif

						

			
Accessions: TBX19_methyl_1 (HT-SELEX2 May2017)

			
Names: TBX19
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 21
Consensus: wAcGTGtkAawtTmaCACcTh
Weblogo: 
PSSM: P0      A      C      G      T
01   6005   2817   4449   4952      w
02  17041    883   1792   1723      A
03   2972   6382   4424   4445      c
04   2160    540  17181   1287      G
05     12   2086     71  17640      T
06     95      2  18171     21      G
07   1570   5851    430  15984      t
08    357   1507  10113   7586      k
09  18100     42    395     70      A
10   8098   4440   1415   4271      a
11   8669    753    640   8161      w
12   4400   1569   4440   7815      t
13     64   1154     76  17813      T
14   5313   7253   4474   1184      m
15  15488    643   5763   2119      a
16     20  18184     24     93      C
17  17616    113   2004     22      A
18    774  17789    277   1149      C
19   3072  15245   4404   1902      c
20   1843   1925    737  16898      T
21   4758   4626   2407   6432      h
Binding TFs: TBX19 (T-box)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.