DNA Binding Motif

						

			
Accessions: M0634 (AthalianaCistrome v4_May2016)

			
Names: NAC2.ampDAP, T23018;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: CTTGttsyvCAAGaAA
Weblogo: 
PSSM: P0      A      C      G      T
01      8    589      1      1      C
02      0      3    147    449      T
03      0      1      0    598      T
04     68     67    456      8      G
05    104    131     26    338      t
06     86    117    137    259      t
07    117    173    170    139      s
08    123    232     72    172      y
09    210    156    155     78      v
10      2    585      5      7      C
11    599      0      0      0      A
12    562     37      0      0      A
13      0      0    599      0      G
14    325     98     66    110      a
15    455     94      0     50      A
16    579      0      0     20      A
Binding TFs: T23018 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.