DNA Binding Motif

						

			
Accessions: M0688 (AthalianaCistrome v4_May2016)

			
Names: T23654;, VND6.ampDAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: TGCkTgwdtttyAmG
Weblogo: 
PSSM: P0      A      C      G      T
01     79      0     22    499      T
02     91      2    501      6      G
03     13    587      0      0      C
04      0      0    233    367      k
05      0      0      0    600      T
06    109    109    325     57      g
07    180     96     78    246      w
08    177     67    168    188      d
09    115    138    127    220      t
10    113    126     70    291      t
11    133     82    119    266      t
12     11    296     69    224      y
13    600      0      0      0      A
14    332    267      1      0      m
15      2      0    574     24      G
Binding TFs: T23654 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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