DNA Binding Motif

						

			
Accessions: 2wty_AB (3D-footprint 20231221)

			
Names: TRANSCRIPTION FACTOR MAFB
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of the homodimeric MafB in complex with the T-MARE binding site
Length: 13
Consensus: TGCnnACTnAGCA
Weblogo: 
PSSM: P0      A      C      G      T
01      9      9     11     67      T
02      0      0     96      0      G
03      0     96      0      0      C
04     24     24     24     24      n
05     24     24     24     24      n
06     96      0      0      0      A
07      9     67      9     11      C
08      0      0      0     96      T
09     24     24     24     24      n
10     67      9     11      9      A
11      0      0     96      0      G
12      0     96      0      0      C
13     96      0      0      0      A
Type: Heterodimer
Binding TFs: 2wty_A (bZIP transcription factor, bZIP Maf transcription factor)
2wty_B (bZIP transcription factor, bZIP Maf transcription factor)
Binding Sites: 2wty_C
2wty_D
			
Publications: Pogenberg V, Consani Textor L, Vanhille L, Holton S.J, Sieweke M.H, Wilmanns M. Design of a bZip transcription factor with homo/heterodimer-induced DNA-binding preference. Structure (London, England : 1993) 22:466-77 (2014). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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