DNA Binding Motif

						

			
Accessions: HOXC8_methyl_2 (HT-SELEX2 May2017)

			
Names: HOXC8
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: gyaATtrc
Weblogo: 
PSSM: P0      A      C      G      T
01   1443   1279   2419   1640      g
02    517   3591    189   6781      y
03   6781   2867    546   1717      a
04   6781    532    389    445      A
05    476    332    605   6781      T
06   1763    548   2841   6781      t
07   6781    297   3385    658      r
08   1516   2690   1319   1256      c
Binding TFs: HOXC8 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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