DNA Binding Motif

						

			
Accessions: PAX7_12 (HT-SELEX2 May2017)

			
Names: PAX7
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 16
Consensus: ysGTCACGsywATTAr
Weblogo: 
PSSM: P0      A      C      G      T
01   1223   2280   1200   2601      y
02    394   5042   2263    468      s
03      0      0   7305     37      G
04    216      5      0   7305      T
05      0   7305     28    690      C
06   7305      0      0      0      A
07      0   7305      0    430      C
08    128      2   7305      1      G
09      1   4741   2564      0      s
10   1033   1944    508   3821      y
11   2364   1001    542   3400      w
12   5773    172   1532     94      A
13     46     19     71   7305      T
14    121    299     60   7305      T
15   7305     70    145    595      A
16   1968   1677   2101   1560      r
Binding TFs: PAX7 (Homeobox domain, 'Paired box' domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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