DNA Binding Motif
| Accessions: | UN0236.1 (JASPAR 2024), MA1719.1 (JASPAR 2024) |
| Names: | ZNF816 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 18 |
| Consensus: | rrrkGGGGACATGcwgGg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 360 173 317 203 r 02 426 148 308 171 r 03 421 177 340 115 r 04 155 61 284 553 k 05 31 4 1006 12 G 06 10 6 1033 4 G 07 7 6 1035 5 G 08 15 12 1020 6 G 09 1037 3 10 3 A 10 19 1015 13 6 C 11 786 143 89 35 A 12 47 85 111 810 T 13 38 27 949 39 G 14 136 612 53 252 c 15 404 210 174 265 w 16 246 106 508 193 g 17 149 90 732 82 G 18 126 126 683 118 g |
| Type: | Heterodimer |
| Binding TFs: | Q0VGE8 (Zinc finger, C2H2 type, KRAB box, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) Q0VGE8 |
| Binding Sites: | MA1719.1.1 / UN0236.1.1 MA1719.1.5 / MA1719.1.9 / UN0236.1.10 / UN0236.1.6 MA1719.1.10 / UN0236.1.11 MA1719.1.11 / UN0236.1.12 MA1719.1.12 / UN0236.1.13 MA1719.1.14 / UN0236.1.14 MA1719.1.15 / UN0236.1.15 UN0236.1.16 MA1719.1.16 / UN0236.1.17 MA1719.1.17 / UN0236.1.18 MA1719.1.18 / UN0236.1.19 UN0236.1.2 MA1719.1.19 / UN0236.1.20 MA1719.1.2 / UN0236.1.3 MA1719.1.3 / UN0236.1.4 MA1719.1.4 / UN0236.1.5 MA1719.1.6 / UN0236.1.7 MA1719.1.7 / UN0236.1.8 MA1719.1.8 / UN0236.1.9 MA1719.1.13 MA1719.1.20 |
| Publications: | Imbeault M, Helleboid PY, Trono D. KRAB zinc-finger proteins contribute to the evolution of gene regulatory networks. Nature 543:550-554 (2017). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.