DNA Binding Motif

						

			
Accessions: ETV7_3 (HT-SELEX2 May2017), UN0119.1 (JASPAR 2024)

			
Names: ETV7
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1, JASPAR 2024 2
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 16
Consensus: scGGAAGyrCTTCCgs
Weblogo: 
PSSM: P0      A      C      G      T
01   2801   7595   5333   1957      s
02   4836  12850   3532   1720      c
03     43     20  17686      8      G
04     12     14  17686     19      G
05  17686     80     16    337      A
06  17686    218     39    446      A
07   3944   1003  13742    235      G
08    608   4938    518  11622      y
09  11612    530   4963    580      r
10    263  13878   1018   3808      C
11    447     46    271  17686      T
12    340     18     73  17686      T
13     10  17686     18      6      C
14     26  17686     25     28      C
15   1727   3535  12887   4799      g
16   1973   5348   7644   2721      s
Type: Heterodimer
Binding TFs: ETV7 / Q9Y603 (Ets-domain, Sterile alpha motif (SAM)/Pointed domain)
Q9Y603
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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