DNA Binding Motif

						

			
Accessions: DPRX_methyl_1 (HT-SELEX2 May2017)

			
Names: DPRX
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: AGATaATCyy
Weblogo: 
PSSM: P0      A      C      G      T
01   9743    669   2009    986      A
02    818    738  13407    368      G
03  10691   2716      0    170      A
04      0      0      0  13407      T
05  13407   3184   2122   2120      a
06  13407      0      0      0      A
07      0      0    199  13407      T
08   1625  13407     73    240      C
09    409  13407    109   7137      y
10   2807   4261   2815   3524      y
Binding TFs: DPRX (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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