DNA Binding Motif

						

			
Accessions: SOHLH2_methyl_1 (HT-SELEX2 May2017)

			
Names: SOHLH2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: mgmACGTgca
Weblogo: 
PSSM: P0      A      C      G      T
01     34     27     18     25      m
02     54     68    103     73      g
03     42    103      0     23      m
04    103     15      0     21      A
05     21    103      0     18      C
06     16      0    103      0      G
07     28     15      5    103      T
08     41      0    103     42      g
09     46    103     51     49      c
10     48     17     15     23      a
Binding TFs: SOHLH2 (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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