DNA Binding Motif

						

			
Accessions: Zic3_DBD (HumanTF 1.0)

			
Names: Zic3
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 3
Length: 15
Consensus: gaCCCCCyGCTGyGm
Weblogo: 
PSSM: P0      A      C      G      T
01   2200   4808  28519  11567      g
02  27285   4978  10488     78      a
03   1296  37754     58    273      C
04   1479  37901    362    351      C
05   2515  34601    279   1079      C
06      4  38635      0      4      C
07    220  38743      2      8      C
08     25  25195      7  13234      y
09   2659     85  37346     33      G
10     22  37283    662   6918      C
11   2030   2118   6056  34240      T
12    142      9  39958     31      G
13   3954  10442   3630  19188      y
14     23    787  37239   3580      G
15  11330  15346   1541   8128      m
Binding TFs: Zic3_DBD (Zinc finger, C2H2 type, Zinc-finger double-stranded RNA-binding, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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