DNA Binding Motif

						

			
Accessions: ATHB5 (Athamap 20091028)

			
Names: ATHB5
Organisms: Arabidopsis thaliana
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009).  [Pubmed]
Length: 13
Consensus: bsysCAATtATTG
Weblogo: 
PSSM: P0      A      C      G      T
01      0      9     12      9      b
02      4      9     17      4      s
03      2     12      8     14      y
04      2     17     10      7      s
05      0     32      4      3      C
06     32      6      0      1      A
07     39      0      0      0      A
08      0      0      0     39      T
09      2      8      7     22      t
10     39      0      0      0      A
11      0      0      0     39      T
12      0      0      0     39      T
13      0      0     38      1      G
Binding TFs: ATHB5 (Homeobox domain, Homeobox associated leucine zipper)
			
Publications: Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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