DNA Binding Motif

						

			
Accessions: FOXC1_DBD_2 (HumanTF 1.0)

			
Names: FOXC1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 14
Consensus: wrtmAATATTkAyw
Weblogo: 
PSSM: P0      A      C      G      T
01   5830   2784   3525   6645      w
02   5978   1208  12734    218      r
03   4832   2830    867  15996      t
04   9518   7470     54   3153      m
05  14437    115    118    103      A
06  14440     99    142    132      A
07      0   1791     48  20151      T
08  14082     74   1275     11      A
09    326    110    154  20638      T
10    200    102    230  20680      T
11   1808     44  11094  10283      k
12  13352    480   1774   3719      A
13    294  14403   1460   6878      y
14   7841   2384   2791   4932      w
Binding TFs: FOXC1_DBD (Fork head domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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