DNA Binding Motif

						

			
Accessions: 6ki6_B (3D-footprint 20231221)

			
Names: B-cell lymphoma/leukemia 11A
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of BCL11A in complex with gamma-globin -115 HPFH region
Length: 8
Consensus: TGGTCAag
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0     96      T
02      0      0     96      0      G
03      0      0     96      0      G
04      0      0      0     96      T
05      0     96      0      0      C
06     96      0      0      0      A
07     64     16     16      0      a
08     16     16     48     16      g
Binding TFs: 6ki6_B (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Sites: 6ki6_F
6ki6_E
			
Publications: Yang Y, Xu Z, He C, Zhang B, Shi Y, Li F. Structural insights into the recognition of γ-globin gene promoter by BCL11A. Cell Res 29:960-963 (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.