DNA Binding Motif

						

			
Accessions: LHX6_full_3 (HumanTF 1.0)

			
Names: LHX6
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 12
Consensus: TRATTGCAATyA
Weblogo: 
PSSM: P0      A      C      G      T
01     25     36     21   2024      T
02    578     14   1503      7      R
03   1368     43     78      0      A
04      0     55     62   2101      T
05      0     54     79   2063      T
06     33     27   2595      9      G
07      0   2104     23    128      C
08   1414     41     70      0      A
09   1418     65    124     10      A
10      0     98      0   2023      T
11      0   1200     31    879      y
12   1390     25     12     10      A
Binding TFs: LHX6_full (Homeobox domain, LIM domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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