DNA Binding Motif

						

			
Accessions: Esrra_DBD_1 (HumanTF 1.0)

			
Names: Esrra
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 17
Consensus: dAGGTyAkTCAAGGTCA
Weblogo: 
PSSM: P0      A      C      G      T
01    222      0    231    314      d
02    728      0     25      0      A
03      0      0    862      2      G
04      0      3    850     18      G
05    160      0      6    785      T
06      0    782     45    408      y
07    788      0    115      0      A
08      4     96    365    347      k
09      5    128     21    773      T
10    220    709     66      0      C
11    779      0      0      0      A
12    778      0      5      0      A
13      0      0    880      3      G
14      6      0    879      0      G
15      5      1      0    779      T
16      0    876      4    126      C
17    792     21     64      0      A
Binding TFs: Esrra_DBD (Zinc finger, C4 type (two domains))
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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