DNA Binding Motif
| Accessions: | MA1963.2 (JASPAR 2024) |
| Names: | SATB1 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 7 |
| Consensus: | CTAATAA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 262 33122 140 700 C 02 492 195 37 33500 T 03 33670 164 221 169 A 04 32708 115 120 1281 A 05 288 128 123 33685 T 06 32009 485 889 841 A 07 30660 881 1071 1612 A |
| Type: | Heterodimer |
| Binding TFs: | Q01826 (Homeobox domain, CUT domain) Q01826 |
| Binding Sites: | MA1963.2.15 MA1963.2.1 / MA1963.2.11 / MA1963.2.12 / MA1963.2.17 / MA1963.2.18 / MA1963.2.19 / MA1963.2.2 / MA1963.2.20 / MA1963.2.4 / MA1963.2.5 / MA1963.2.6 / MA1963.2.7 / MA1963.2.8 MA1963.2.10 / MA1963.2.9 MA1963.2.13 MA1963.2.14 MA1963.2.16 MA1963.2.3 |
| Publications: | Purbey P. K., Singh S., Kumar P. P., Mehta S., Ganesh K. N., Mitra D., Galande S. PDZ domain-mediated dimerization and homeodomain-directed specificity are required for high-affinity DNA binding by SATB1.. Nucleic Acids Res. 36:2107-2122 (2008). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.