DNA Binding Motif

						

			
Accessions: M0104 (AthalianaCistrome v4_May2016)

			
Names: ERF1.DAP, T14076;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 28
Consensus: cykymwymGCCGCCryyrchrcygycky
Weblogo: 
PSSM: P0      A      C      G      T
01    119    246     88    128      c
02    128    208     69    176      y
03    138    126    164    153      k
04    105    243     84    149      y
05    146    261     48    126      m
06    168     30    143    240      w
07     63    258     56    204      y
08    265    315      1      0      m
09      0      0    577      4      G
10      0    580      0      1      C
11      0    579      0      2      C
12      0      0    581      0      G
13      0    581      0      0      C
14      2    578      0      1      C
15    257      7    244     73      r
16     19    300     51    211      y
17    122    231     46    182      y
18    218     42    188    133      r
19    143    215     80    143      c
20    158    200     68    155      h
21    186     59    198    138      r
22    121    222    104    134      c
23    121    215     84    161      y
24    140    130    191    120      g
25    122    205     80    174      y
26    131    228     92    130      c
27    142    106    178    155      k
28    123    199    108    151      y
Binding TFs: T14076 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.