DNA Binding Motif

						

			
Accessions: MA1351.2 (JASPAR 2024)

			
Names: GBF3
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 11
Consensus: sACGTGGCAww
Weblogo: 
PSSM: P0      A      C      G      T
01   1144   4087   2431   1799      s
02   7456    509    636    860      A
03    260   8349    340    512      C
04    341    139   8749    232      G
05    136    113     27   9185      T
06    133     60   9137    131      G
07    385    212   7410   1454      G
08    828   8130    275    228      C
09   7429    400    831    801      A
10   2879   1756   1943   2883      w
11   2928   1909   1879   2745      w
Type: Heterodimer
Binding TFs: P42776 (bZIP transcription factor, Basic region leucine zipper, G-box binding protein MFMR)
P42776
Binding Sites: MA1351.2.1
MA1351.2.10
MA1351.2.11
MA1351.2.12
MA1351.2.13
MA1351.2.14
MA1351.2.15
MA1351.2.16
MA1351.2.17
MA1351.2.18
MA1351.2.19
MA1351.2.2
MA1351.2.20
MA1351.2.3
MA1351.2.4
MA1351.2.5
MA1351.2.6
MA1351.2.7
MA1351.2.8
MA1351.2.9
			
Publications: Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.