DNA Binding Motif

						

			
Accessions: M0702 (AthalianaCistrome v4_May2016)

			
Names: NAP.ampDAP, T03002;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 17
Consensus: TkaCGTrwwkwwyACGk
Weblogo: 
PSSM: P0      A      C      G      T
01     59      0      0    363      T
02     52      2    132    236      k
03    214     77    101     30      a
04      3    417      0      2      C
05      0      0    412     10      G
06      0      1      6    415      T
07    119     38    246     19      r
08    110     48     46    218      w
09    139     75     91    117      w
10     92     86    118    126      k
11    134     65     90    133      w
12    199     26     69    128      w
13     24    185     78    135      y
14    392      9      3     18      A
15     77    330     11      4      C
16      0      0    416      6      G
17     71    100    126    125      k
Binding TFs: T03002 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.