DNA Binding Motif

						

			
Accessions: M0642 (AthalianaCistrome v4_May2016)

			
Names: T18388;, VND2.DAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: CkTraaahwcAmGYA
Weblogo: 
PSSM: P0      A      C      G      T
01     24    576      0      0      C
02      0      0    259    341      k
03      0      0      0    600      T
04    169     71    341     19      r
05    246    116     97    141      a
06    295     66    125    114      a
07    216    132    142    110      a
08    183    180     82    155      h
09    254     74    107    165      w
10     40    344     96    120      c
11    600      0      0      0      A
12    349    251      0      0      m
13      0      0    578     22      G
14      6    431      6    157      Y
15    436     43      1    120      A
Binding TFs: T18388 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.