DNA Binding Motif

Accessions: UN0420.2 (JASPAR 2024)
Names: GLYMA-08G357600
Organisms: Glycine max
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 7
Consensus: aCGTGTC
Weblogo:
PSSM: P0 A C G T
01 3654 593 1107 1059 a
02 17 6396 0 0 C
03 0 1 6412 0 G
04 217 547 124 5525 T
05 302 191 5839 81 G
06 200 134 525 5554 T
07 288 6073 0 52 C
Type: Heterodimer
Binding TFs: I1KZD3 (B3 DNA binding domain)
I1KZD3
Binding Sites: UN0420.2.9
UN0420.2.10 / UN0420.2.20
UN0420.2.19 / UN0420.2.8
UN0420.2.1 / UN0420.2.14 / UN0420.2.16 / UN0420.2.17 / UN0420.2.18 / UN0420.2.3
UN0420.2.13
UN0420.2.11
UN0420.2.12
UN0420.2.15
UN0420.2.2 / UN0420.2.4 / UN0420.2.6 / UN0420.2.7
UN0420.2.5

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.