Transcription Factor
| Accessions: | I1KZD3 (JASPAR 2024) |
| Names: | I1KZD3_SOYBN |
| Organisms: | Glycine max |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | I1KZD3 |
| Length: | 734 |
| Pfam Domains: | 581-677 B3 DNA binding domain |
| Sequence: (in bold interface residues) | 1 MEDEHTLAVAEREMWLNSDQDEFLGVNDASMFYADFPPLPDFPCMSSSSSSSSATPLPVK 60 61 TMTCSTTTTTSSSSSSSSWAMLKSDAEEDAEKNHCNRYMHDQLDATLSSTASMEISQQQN 120 121 PDPGLGGTVGECMDDVMDTFGYMELLEANDFFDPASIFQNEGNENPLEEFGTLEEHVPFH 180 181 EEQHAMVHHQQGQAEEEDHQVPFCEEIQGDEEGGDGVGVDDEMSNVFLEWLKSNKDSVSA 240 241 NDLRNVKLKKATLESAARRLGGGKEAMKQLLKLILEWVQTSHLQNKRRKENNGSSISSVL 300 301 QAQFQDPSGQNNNQNTQSGSFAPESNTCFNNQTPWLSSQTFATDQAPLMVPPQQFPQPMV 360 361 GYVGDPYTSGAASNNISATHNHNNSNPYQPGAEQYHMLESAHSWPHSLFNVASNYSQSFG 420 421 DNNGLNPHGGFGGGGYGNNQYPYQFFHGPGDRLMRLGPSATKEARKKRMARQRRFLSHHR 480 481 HHSGNHQNQGSDPHARMGGDNCNTALAAPHHANPSANWMYWQAMIGGAAGPLAPVIPAEP 540 541 PVVQPVVDRSAMQTQNCHQNRVASDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKK 600 601 EAETHLPELEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEG 660 661 DFIVIYSDVKCGKYMIRGVKVRQQGVKPETKKAGKSQKNQHGTGTNASSTAGTAANNGTS 720 721 SSPKTKSEKSSKLI |
| Interface Residues: | 585, 587, 592, 593, 594, 596, 635, 637, 638, 639, 640, 642 |
| 3D-footprint Homologues: | 6j9b_A, 6j9c_D, 7et6_A, 6fas_B |
| Binding Motifs: | MA1810.1 wcaTGCATGCAkgw UN0420.1 yaCGTGTCwh MA1810.2 aTGCATGCA UN0420.2 aCGTGTC |
| Binding Sites: | UN0420.1.9 UN0420.1.20 UN0420.1.19 MA1810.1.1 / MA1810.1.3 MA1810.1.10 / MA1810.1.14 MA1810.1.11 / MA1810.1.16 MA1810.1.12 / MA1810.1.19 MA1810.1.13 MA1810.1.14 MA1810.1.15 MA1810.1.16 MA1810.1.17 MA1810.1.18 MA1810.1.19 MA1810.1.2 MA1810.1.20 MA1810.1.3 / MA1810.1.4 MA1810.1.4 / MA1810.1.6 MA1810.1.5 / MA1810.1.7 MA1810.1.6 / MA1810.1.8 MA1810.1.7 / MA1810.1.9 MA1810.1.11 / MA1810.1.8 MA1810.1.12 / MA1810.1.9 UN0420.1.1 / UN0420.1.2 UN0420.1.10 UN0420.1.11 UN0420.1.12 UN0420.1.13 UN0420.1.14 UN0420.1.15 UN0420.1.16 / UN0420.1.3 / UN0420.1.4 UN0420.1.17 UN0420.1.18 UN0420.1.2 / UN0420.1.3 UN0420.1.10 / UN0420.1.4 UN0420.1.12 / UN0420.1.5 UN0420.1.13 / UN0420.1.6 UN0420.1.14 / UN0420.1.7 UN0420.1.15 / UN0420.1.8 UN0420.1.19 / UN0420.1.9 UN0420.2.9 UN0420.2.10 / UN0420.2.20 UN0420.2.19 / UN0420.2.8 UN0420.2.1 / UN0420.2.14 / UN0420.2.16 / UN0420.2.17 / UN0420.2.18 / UN0420.2.3 UN0420.2.13 MA1810.1.1 MA1810.1.10 MA1810.1.13 MA1810.1.15 MA1810.1.17 MA1810.1.18 MA1810.1.2 MA1810.1.20 MA1810.1.5 MA1810.2.1 MA1810.2.10 MA1810.2.11 MA1810.2.12 / MA1810.2.9 MA1810.2.13 MA1810.2.14 MA1810.2.15 MA1810.2.16 MA1810.2.17 MA1810.2.18 MA1810.2.19 MA1810.2.2 MA1810.2.20 MA1810.2.3 MA1810.2.4 MA1810.2.5 MA1810.2.6 MA1810.2.7 MA1810.2.8 UN0420.2.11 UN0420.1.1 UN0420.1.11 UN0420.1.16 UN0420.1.17 UN0420.1.18 UN0420.1.20 UN0420.1.5 UN0420.1.6 UN0420.1.7 UN0420.1.8 UN0420.2.12 UN0420.2.15 UN0420.2.2 / UN0420.2.4 / UN0420.2.6 / UN0420.2.7 UN0420.2.5 |
| Publications: | Sasnauskas G, Kauneckaite K, Siksnys V. Structural basis of DNA target recognition by the B3 domain of Arabidopsis epigenome reader VAL1. Nucleic Acids Res 46:4316-4324 (2018). [Pubmed] |
| Related annotations: | PaperBLAST |
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