DNA Binding Motif

						

			
Accessions: ONECUT1_2 (HT-SELEX2 May2017)

			
Names: ONECUT1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: gyATCGATys
Weblogo: 
PSSM: P0      A      C      G      T
01   3497   3750   5076   3308      g
02   4200   6881   4513   8750      y
03  15632      0     50      0      A
04      0      0      6  15632      T
05      0  15632      0   3398      C
06      0      0  15632      0      G
07  15632      0      0      0      A
08      0   2613      0  15632      T
09    378   8969    124   6662      y
10   3608   3972   4638   3414      s
Binding TFs: ONECUT1 (Homeobox domain, CUT domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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