DNA Binding Motif

						

			
Accessions: EEAD0024 (EEADannot 2025-01-07)

			
Names: ARF4_DYAD0
Organisms: Zea mays
Libraries: EEADannot 2025-01-07 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Length: 10
Consensus: arACATGTyt
Weblogo: 
PSSM: P0      A      C      G      T
01    950    569    589    350      a
02    982    359    735    382      r
03   2458      0      0      0      A
04      0   2458      0      0      C
05   2458      0      0      0      A
06      0      0      0   2458      T
07      0      0   2458      0      G
08      0      0      0   2458      T
09    382    735    359    982      y
10    350    589    569    950      t
Binding TFs: AuxinResponseFactor4 (AUX/IAA family, B3 DNA binding domain, Auxin response factor)
			
Publications: Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.