Transcription Factor
| Accessions: | AuxinResponseFactor4 (EEADannot 2023-12-22) |
| Names: | ARF4, GRMZM2G034840 |
| Organisms: | Zea mays |
| Libraries: | EEADannot 2023-12-22 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:ARF |
| Length: | 936 |
| Pfam Domains: | 144-245 B3 DNA binding domain 270-352 Auxin response factor 827-922 AUX/IAA family |
| Sequence: (in bold interface residues) | 1 MMTSSYEKATSGVLRNAAALLDEMQLMGETQGAKKVINSELWHACAGPLVCLPQRGSLVY 60 61 YFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNITLHADKETDEIYAQMTLQPVH 120 121 SETDVFPIPTLGAYTKSKHPSEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPP 180 181 NQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLV 240 241 GVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARY 300 301 NMATYLQPSVGMRFAMMFETEESSKRRCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGY 360 361 GERPERVSLWDIETPENMVFSSPLNSKRQCLPSYGVSGLHVSSISKPQGSPFGNLQHMPG 420 421 ISSDIALLLLNQSAQNLGSSIACQQSSFSSIIQNAKQSYFPPTTLGASTGWNESQQQLNA 480 481 LGIQKGDQVSCDVQPGIDSITAPEMNVKPRVPRSTDSYSSQSISDPNSKSDPKTKTRRSK 540 541 KSSSHKTISDKSEISSVPSQICDKQRHGSEPTSADFEAEQATCGNNEDSSGALTRGDFAG 600 601 ELQVQQVEQDGLLPPPKLESSKSPDGGKSVSSFPNQGCFSQFFEGLDWMIPPSCYQDSNG 660 661 IHSVTTSDSIFNPSEGIPPSTMNADGMDAFQTSCLSECFPNSIQEFISSPDINTLTFMSP 720 721 EMQHLDAQHDGSNLQSTSNSYVQMSFSEESQSASLSGLHMEAVHINSSCLQPLATGSFDA 780 781 GTFSKLSNIKECQALPLQEIHNSSMGTPSCSMDAAAVEYCMDRSVKPLKPPVRTYTKVQK 840 841 LGSVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYENDVLLVGDDPW 900 901 EEFINCVRCIRILAPSEVQQMSENGVHVLNDCMQMA |
| Interface Residues: | 149, 151, 156, 157, 158, 159, 160, 161, 201, 202, 203, 204, 206, 207 |
| 3D-footprint Homologues: | 6j9b_A, 7et6_A, 6j9c_D, 6sdg_B, 3hqf_A, 6ycq_A |
| Binding Motifs: | EEAD0023 TGTCk EEAD0024 arACATGTyt |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.