DNA Binding Motif

						

			
Accessions: REST_MOUSE.H10MO.A|M01321 (HOCOMOCO 10)

			
Names: Rest
Organisms: Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Factors with multiple dispersed zinc fingers{2.3.4}; unclassified{2.3.4.0}
Length: 21
Consensus: yCaGsACCayGGACAGcdcCc
Weblogo: 
PSSM: P0      A      C      G      T
01     26    132     55    218      y
02     48    314     42     27      C
03    267     38     73     53      a
04     39     66    305     21      G
05     54    244    113     20      s
06    334     24     24     49      A
07     57    322     33     19      C
08     23    299     43     66      C
09    238     55     71     67      a
10     47    116     35    233      y
11     22     10    395      4      G
12     16     11    404      0      G
13    323     73     20     15      A
14     21    333     72      5      C
15    407      8     13      3      A
16     11      7    410      3      G
17     80    290     19     42      c
18    140      2    142    147      d
19    107    250     56     18      c
20     75    312     12     32      C
21     83    216     38     94      c
Binding TFs: REST_MOUSE (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc-finger domain)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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