DNA Binding Motif

						

			
Accessions: MA1983.1 (JASPAR 2024)

			
Names: ZNF582
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 21
Consensus: tcTgTTACTTGCAGCCaAAwg
Weblogo: 
PSSM: P0      A      C      G      T
01     25     36     34    198      t
02     26    174     24     69      c
03     30     33     18    212      T
04     31     57    161     44      g
05      6     11      4    272      T
06      4      4      7    278      T
07    248     40      1      4      A
08     10    270      1     12      C
09      7     13      7    266      T
10      2      1      1    289      T
11      4      1    282      6      G
12      3    285      1      4      C
13    262     14      5     12      A
14      8     10    265     10      G
15      5    283      2      3      C
16      6    213      1     73      C
17    127     61     59     46      a
18    244     12     23     14      A
19    233     15     29     16      A
20    137     51     26     79      w
21     57     18    191     27      g
Type: Heterodimer
Binding TFs: Q96NG8 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q96NG8
Binding Sites: MA1983.1.1
MA1983.1.10 / MA1983.1.9
MA1983.1.10 / MA1983.1.11
MA1983.1.11 / MA1983.1.12
MA1983.1.12 / MA1983.1.13
MA1983.1.13 / MA1983.1.14
MA1983.1.14 / MA1983.1.15
MA1983.1.15 / MA1983.1.16
MA1983.1.17
MA1983.1.16 / MA1983.1.18
MA1983.1.17 / MA1983.1.19
MA1983.1.2
MA1983.1.18 / MA1983.1.20
MA1983.1.3
MA1983.1.4
MA1983.1.4 / MA1983.1.5
MA1983.1.5 / MA1983.1.6
MA1983.1.6 / MA1983.1.7
MA1983.1.7 / MA1983.1.8
MA1983.1.8 / MA1983.1.9
MA1983.1.19
MA1983.1.20
			
Publications: Li X, Qiu S, Shi J, Wang S, Wang M, Xu Y, Nie Z, Liu C, Liu C. A new function of copper zinc superoxide dismutase: as a regulatory DNA-binding protein in gene expression in response to intracellular hydrogen peroxide. Nucleic Acids Res 47:5074-5085 (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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