DNA Binding Motif

						

			
Accessions: MAX_methyl_1 (HT-SELEX2 May2017)

			
Names: MAX
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 19
Consensus: mCATGTGmytrmCAYGTGs
Weblogo: 
PSSM: P0      A      C      G      T
01   1868   3075    880    256      m
02     84   6079     24      0      C
03   6079      0      0      6      A
04      7   1820      0   6079      T
05      5      0   6079      0      G
06     26    906      0   6079      T
07      0     60   6079      0      G
08   1584   2738   1223    533      m
09   1089   1730    977   2283      y
10   1318   1382   1431   1948      t
11   2222    653   2211    993      r
12   1588   3149   1043    299      m
13      0   6079      0      6      C
14   6079     11      0      0      A
15      0   2568      0   6079      Y
16      8      0   6079      0      G
17     15   1250      0   6079      T
18      0      4   6079     27      G
19   1342   2368   1639    730      s
Binding TFs: MAX (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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