DNA Binding Motif

						

			
Accessions: UN0349.1 (JASPAR 2024)

			
Names: ANAC096
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 24
Consensus: wrgTTaCTTGtrwyaCAAGtAAyc
Weblogo: 
PSSM: P0      A      C      G      T
01    513    233    170    328      w
02    321    134    526    263      r
03    216     96    748    184      g
04     26      5      2   1211      T
05    153      2     55   1034      T
06    682    115    192    255      a
07      7   1234      0      3      C
08      0      0     75   1169      T
09      0      3      1   1240      T
10     95    176    890     83      G
11    265    206    126    647      t
12    319    192    445    288      r
13    339    278    290    337      w
14    285    449    171    339      y
15    653    111    212    268      a
16     77    873    190    104      C
17   1242      0      1      1      A
18   1173     70      0      1      A
19      2      0   1237      5      G
20    226    191    131    696      t
21   1030     58      4    152      A
22   1206      3      5     30      A
23    280    471    157    336      y
24    243    516    179    306      c
Type: Heterodimer
Binding TFs: Q9LS24 (No apical meristem (NAM) protein)
Q9LS24
Binding Sites: UN0349.1.10
UN0349.1.11
UN0349.1.14
UN0349.1.15
UN0349.1.16
UN0349.1.17
UN0349.1.18
UN0349.1.6
UN0349.1.7
UN0349.1.8
UN0349.1.9
UN0349.1.19
UN0349.1.1
UN0349.1.12
UN0349.1.13
UN0349.1.2
UN0349.1.20
UN0349.1.3
UN0349.1.4
UN0349.1.5
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.