DNA Binding Motif

						

			
Accessions: MA2105.1 (JASPAR 2024)

			
Names: GLYMA-13G317000
Organisms: Glycine max
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 6
Consensus: ACACGT
Weblogo: 
PSSM: P0      A      C      G      T
01  15158    355    177    229      A
02     11  15390     93    425      C
03  13931    118   1340    530      A
04      0  15919      0      0      C
05      0      0  15919      0      G
06    290    365     65  15199      T
Type: Heterodimer
Binding TFs: K7M309 (bZIP transcription factor, Basic region leucine zipper)
K7M309
Binding Sites: MA2105.1.1 / MA2105.1.11 / MA2105.1.12 / MA2105.1.13 / MA2105.1.14 / MA2105.1.2 / MA2105.1.20 / MA2105.1.3 / MA2105.1.7 / MA2105.1.8 / MA2105.1.9
MA2105.1.10
MA2105.1.15 / MA2105.1.19 / MA2105.1.6
MA2105.1.16
MA2105.1.17 / MA2105.1.18 / MA2105.1.4 / MA2105.1.5
			
Publications: Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.