Transcription Factor
| Accessions: | K7M309 (JASPAR 2024) |
| Names: | K7M309_SOYBN |
| Organisms: | Glycine max |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | K7M309 |
| Length: | 336 |
| Pfam Domains: | 253-303 Basic region leucine zipper 254-304 bZIP transcription factor |
| Sequence: (in bold interface residues) | 1 MSLQQPNQEVPLQEPEATFSQLSKQNSILSLTLDEFYCKNGKSLGSMNMDEFLSSIWNSD 60 61 DNNQVNPPLPTLDEAAKGKSVIATEPTTISQPGSLSVPPPICKKTVDEVWSQIHKSQPDH 120 121 NDANNSLARNEPLLKRQQTLGEMTLEDFLVKAGVVQESSSLFKSSLLPQNQIGNIASNGP 180 181 LGAGYRLRPVIGTGSSVSCNGLETQNMLAQNNNLVVKDLTTNGAVEKCPSLGESNGKGNR 240 241 KRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQTLAE 300 301 AERKRKQEISQRKHTTMAQKRTENLRAMRRPLSASW |
| Interface Residues: | 258, 262, 265, 266, 269, 270 |
| 3D-footprint Homologues: | 2wt7_A, 7x5e_F, 2wt7_B, 7x5e_E, 5vpe_C, 1dh3_C |
| Binding Motifs: | MA1811.1 caCGTGGCAyw UN0421.1 wgACACGTgk MA1811.2 aCGTGGCA MA2105.1 ACACGT |
| Binding Sites: | MA1811.2.10 / MA1811.2.4 / MA1811.2.6 MA1811.2.13 MA1811.2.1 MA1811.2.11 MA1811.1.1 MA1811.1.16 / MA1811.1.9 MA1811.1.10 / MA1811.1.17 MA1811.1.11 / MA1811.1.19 MA1811.1.13 MA1811.1.15 MA1811.1.16 MA1811.1.4 / MA1811.1.9 MA1811.1.5 MA1811.1.11 / MA1811.1.6 MA1811.1.12 / MA1811.1.20 MA1811.1.14 MA1811.1.17 MA1811.1.18 MA1811.1.19 MA1811.1.2 MA1811.1.20 MA1811.1.3 / MA1811.1.8 MA1811.1.13 / MA1811.1.7 MA1811.1.14 / MA1811.1.8 UN0421.1.1 UN0421.1.10 UN0421.1.11 / UN0421.1.14 UN0421.1.12 UN0421.1.13 UN0421.1.15 UN0421.1.16 UN0421.1.17 UN0421.1.18 UN0421.1.19 UN0421.1.2 UN0421.1.20 UN0421.1.3 UN0421.1.4 UN0421.1.5 UN0421.1.6 UN0421.1.7 UN0421.1.8 UN0421.1.9 MA1811.2.2 MA1811.1.6 MA1811.1.7 MA1811.1.12 MA1811.1.3 MA1811.1.4 MA1811.1.5 MA1811.2.18 / MA1811.2.9 MA1811.2.15 MA1811.2.16 / MA1811.2.5 MA1811.1.10 MA1811.1.15 MA1811.1.18 MA1811.2.12 MA1811.2.14 MA1811.2.17 MA1811.2.19 MA1811.2.20 MA1811.2.3 MA1811.2.7 MA1811.2.8 MA2105.1.1 / MA2105.1.11 / MA2105.1.12 / MA2105.1.13 / MA2105.1.14 / MA2105.1.2 / MA2105.1.20 / MA2105.1.3 / MA2105.1.7 / MA2105.1.8 / MA2105.1.9 MA2105.1.10 MA2105.1.15 / MA2105.1.19 / MA2105.1.6 MA2105.1.16 MA2105.1.17 / MA2105.1.18 / MA2105.1.4 / MA2105.1.5 |
| Publications: | Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). [Pubmed] Liao Y, Zou HF, Wei W, Hao YJ, Tian AG, Huang J, Liu YF, Zhang JS, Chen SY. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Planta 228:225-40 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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