DNA Binding Motif
| Accessions: | MA1824.1 (JASPAR 2024) |
| Names: | Zm00001d005692 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 12 |
| Consensus: | wmcAATAATtrw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1156 633 652 815 w 02 1009 821 681 745 m 03 440 1879 254 683 c 04 3130 34 27 65 A 05 3145 30 24 57 A 06 31 47 32 3146 T 07 2697 148 148 263 A 08 3173 18 28 37 A 09 72 19 26 3139 T 10 706 240 520 1790 t 11 912 699 925 720 r 12 1010 563 674 1009 w |
| Type: | Heterodimer |
| Binding TFs: | C0PNY4 (Homeobox domain, Homeobox associated leucine zipper) C0PNY4 |
| Binding Sites: | MA1824.1.1 MA1824.1.10 / MA1824.1.11 MA1824.1.11 / MA1824.1.13 MA1824.1.12 / MA1824.1.14 MA1824.1.13 / MA1824.1.15 MA1824.1.14 / MA1824.1.17 MA1824.1.15 / MA1824.1.18 MA1824.1.16 / MA1824.1.19 MA1824.1.17 MA1824.1.18 / MA1824.1.20 MA1824.1.19 MA1824.1.2 MA1824.1.20 MA1824.1.2 / MA1824.1.3 MA1824.1.4 MA1824.1.5 MA1824.1.6 MA1824.1.7 MA1824.1.8 MA1824.1.10 / MA1824.1.9 MA1824.1.12 MA1824.1.16 MA1824.1.3 MA1824.1.9 |
| Publications: | Sessa G., Morelli G., Ruberti I. The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities. EMBO J. 12:3507-3517 (1993). [Pubmed] |
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