Transcription Factor
| Accessions: | C0PNY4 (JASPAR 2024) |
| Names: | C0PNY4_MAIZE, HB transcription factor, Homeobox-leucine zipper protein HAT5 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | C0PNY4 |
| Length: | 283 |
| Pfam Domains: | 89-150 Homeobox domain 152-196 Homeobox associated leucine zipper |
| Sequence: (in bold interface residues) | 1 MDPASSLISSSAVPFPAAGDGGGQRQVFLFGGGFVGGAPPLVGGAADGRRKRPFQLTAHD 60 61 ELQLQLQLQLDDELCGLDYELHGPQQERTTKRRLTAEQVRELELSFEEEKRKLEPKRKLE 120 121 PERKSELARRLGIAPRQVAVWFQNRRARWRSKQLEQDFDRLRAAHDDLIAGRDALLADND 180 181 RLRSQVITLTEKLQTKESAAAAAEPGEQTVAAQATAYAVLEGDKLCSGSAAAPAAAGTND 240 241 SPESYFAGARSPPSSPEDDDRAFFFPPDALLNNWAWVWNDRQY |
| Interface Residues: | 85, 86, 88, 89, 90, 91, 92, 93, 136, 137, 139, 140, 143, 144, 147, 148, 151 |
| 3D-footprint Homologues: | 3cmy_A, 1zq3_P, 3a01_E, 1fjl_B, 2h1k_B, 5hod_A, 1nk2_P, 2ld5_A, 1b72_A, 2r5y_A, 4cyc_A, 5jlw_D, 1ig7_A, 7q3o_C, 1le8_A, 4xrs_G, 8g87_X, 5zfz_A, 5flv_I, 5zjt_E, 4qtr_D, 2lkx_A, 1puf_A, 7psx_B, 3lnq_A, 2hdd_A, 1jgg_B, 6a8r_A, 4xrm_B, 1puf_B, 1du0_A, 3rkq_B, 6es3_K, 2hos_A, 6m3d_C |
| Binding Motifs: | MA1824.1 wmcAATAATtrw MA1824.2 cAATAATt |
| Binding Sites: | MA1824.2.18 MA1824.2.4 / MA1824.2.7 / MA1824.2.8 MA1824.1.1 MA1824.1.10 / MA1824.1.11 MA1824.1.11 / MA1824.1.13 MA1824.1.12 / MA1824.1.14 MA1824.1.13 / MA1824.1.15 MA1824.1.14 / MA1824.1.17 MA1824.1.15 / MA1824.1.18 MA1824.1.16 / MA1824.1.19 MA1824.1.17 MA1824.1.18 / MA1824.1.20 MA1824.1.19 MA1824.1.2 MA1824.1.20 MA1824.1.2 / MA1824.1.3 MA1824.1.4 MA1824.1.5 MA1824.1.6 MA1824.1.7 MA1824.1.8 MA1824.1.10 / MA1824.1.9 MA1824.2.12 / MA1824.2.15 / MA1824.2.19 / MA1824.2.6 / MA1824.2.9 MA1824.2.13 / MA1824.2.16 MA1824.1.12 MA1824.1.16 MA1824.1.3 MA1824.1.9 MA1824.2.1 / MA1824.2.20 MA1824.2.10 MA1824.2.11 MA1824.2.14 / MA1824.2.3 MA1824.2.17 MA1824.2.2 MA1824.2.5 |
| Publications: | Sessa G., Morelli G., Ruberti I. The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities. EMBO J. 12:3507-3517 (1993). [Pubmed] |
| Related annotations: | PaperBLAST |
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