DNA Binding Motif
| Accessions: | 4qr9_AB (3D-footprint 20231221) |
| Names: | High mobility group protein B1 |
| Organisms: | Rattus norvegicus |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Crystal structure of two HMGB1 Box A domains cooperating to underwind and kink a DNA |
| Length: | 4 |
| Consensus: | tCGa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 13 13 13 57 t 02 0 96 0 0 C 03 0 0 96 0 G 04 54 16 13 13 a |
| Binding TFs: | 4qr9_A / 4qr9_B (HMG (high mobility group) box, Domain of unknown function (DUF1898)) |
| Binding Sites: | 4qr9_C 4qr9_D |
| Publications: | Sánchez-Giraldo R, Acosta-Reyes FJ, Malarkey CS, Saperas N, Churchill ME, Campos JL. Two high-mobility group box domains act together to underwind and kink DNA. Acta Crystallogr D Biol Crystallogr : (2015). [Pubmed] |
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