DNA Binding Motif

						

			
Accessions: 3coq_AB (3D-footprint 20231221)

			
Names: Regulatory protein GAL4
Organisms: Saccharomyces cerevisiae, Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structural Basis for Dimerization in DNA Recognition by Gal4
Length: 17
Consensus: cGGnnnnnnnnnnnCCg
Weblogo: 
PSSM: P0      A      C      G      T
01     13     57     13     13      c
02      0      0     96      0      G
03      0      0     96      0      G
04     24     24     24     24      n
05     24     24     24     24      n
06     24     24     24     24      n
07     24     24     24     24      n
08     24     24     24     24      n
09     24     24     24     24      n
10     24     24     24     24      n
11     24     24     24     24      n
12     24     24     24     24      n
13     24     24     24     24      n
14     24     24     24     24      n
15      0     96      0      0      C
16      0     96      0      0      C
17     16     13     54     13      g
Binding TFs: 3coq_A / 3coq_B (Fungal Zn(2)-Cys(6) binuclear cluster domain, Gal4-like dimerisation domain)
Binding Sites: 3coq_D
3coq_E
			
Publications: Hong M, Fitzgerald M.X, Harper S, Luo C, Speicher D.W, Marmorstein R. Structural basis for dimerization in DNA recognition by Gal4. Structure (London, England : 1993) 16:1019-26 (2008). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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