DNA Binding Motif

						

			
Accessions: RFX3_FIGLA_2 (HumanTF2 1.0)

			
Names: RFX3_FIGLA
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 19
Consensus: wrGcAACgsmmCAssTGka
Weblogo: 
PSSM: P0      A      C      G      T
01    929    292    213   1944      w
02    675     61   1269     15      r
03    412    130   1944     64      G
04    109   1413    134    530      c
05   1944     21    457    371      A
06   1944     35     72     26      A
07      9   1944     42    115      C
08    363    454    905    221      g
09    275    602    605    461      s
10    709    538    416    280      m
11    957    532    333    122      m
12     20   1944      0      5      C
13   1944      0     23    130      A
14      4    765   1178      0      s
15     41    847   1096      0      s
16     40     24     23   1944      T
17     13     18   1944     28      G
18    155    275    825    688      k
19    718    403    450    372      a
Type: Heterodimer
Binding TFs: FIGLA_TF2 (Helix-loop-helix DNA-binding domain)
RFX3_TF1 (RFX DNA-binding domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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