DNA Binding Motif

						

			
Accessions: IRF1_HUMAN.H10MO.A|M01266 (HOCOMOCO 10)

			
Names: IRF1
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Interferon-regulatory factors{3.5.3}; IRF-1{3.5.3.0.1}
Length: 20
Consensus: raaagtGAAAGtGAAAsyra
Weblogo: 
PSSM: P0      A      C      G      T
01     86     49    113     46      r
02    167     32     67     28      a
03    192     19     48     35      a
04    191     30     51     22      a
05     58     68    128     40      g
06     66     66     66     96      t
07     61      4    223      6      G
08    273      3     14      4      A
09    276      7      9      2      A
10    282      4      4      4      A
11     35     50    207      2      G
12     31     64      7    192      t
13      9      4    281      0      G
14    252      7     32      3      A
15    269      9     14      2      A
16    280      2      9      3      A
17      5    103    180      6      s
18     19     74     16    185      y
19    111     39    117     27      r
20    139     56     73     26      a
Binding TFs: IRF1_HUMAN (Interferon regulatory factor transcription factor)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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