DNA Binding Motif

						

			
Accessions: GATA5_3 (HT-SELEX2 May2017)

			
Names: GATA5
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: swGATAAsrr
Weblogo: 
PSSM: P0      A      C      G      T
01   3034   6046   5266   3603      s
02   9376   5609    891   8572      w
03      0      0  17949      0      G
04  17949      0      0      0      A
05      0      0      0  17949      T
06  17949    270     65   1390      A
07  17949   1083   1789   1499      A
08   1099   7692  10256   1452      s
09   6780   4137  11169   1613      r
10   4846   4424   4875   3804      r
Binding TFs: GATA5 (GATA zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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