Transcription Factor
| Accessions: | Q10655 (JASPAR 2024) |
| Names: | ELT2_CAEEL, GATA-type domain-containing protein elt-2, Transcription factor elt-2 |
| Organisms: | Caenorhabditis elegans |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q10655 |
| Length: | 433 |
| Pfam Domains: | 237-269 GATA zinc finger |
| Sequence: (in bold interface residues) | 1 MDNNYNDNVNGWAEMEPSQPMGGLRLPTQNMDPPEQNNESQLSELPRMKIDNDYASPIER 60 61 QSVITSGTNNYEPKVETVTSFFHTGIDYSNFGMLDQTTMQPFYPLYSGIPVNTLGTFSGY 120 121 TNSIYDKPSLYDPSIPTINIPSTYPTVAPTYECVKCSQSCGAGMKAVNGGMMCVNCSTPK 180 181 TTYSPPVAYSTSLGQPPILEIPSEQPTAKIAKQSSKKSSSSNRGSNGSASRRQGLVCSNC 240 241 NGTNTTLWRRNAEGDPVCNACGLYFKLHHIPRPTSMKKEGALQTRKRKSKSGDSSTPSTS 300 301 RARERKFERASSSTEKAQRSSNRRAGSAKADRELSTAAVAAATATYVSHADLYPVSSAAV 360 361 TLPDQTYSNYYQWNTAATAGLMMVPNDQNYVYAATNYQTGLRPADNIQVHVMPVQDDETK 420 421 AAARDLEAVDGDS |
| Interface Residues: | 246, 247, 249, 259, 263, 264, 267, 285, 287, 288 |
| 3D-footprint Homologues: | 1gat_A, 3dfx_B, 3vd6_C, 4gat_A |
| Binding Motifs: | MA1701.1 ttCTTATCAr MA1701.2 tCTTATCA |
| Binding Sites: | MA1701.2.19 MA1701.2.3 / MA1701.2.8 MA1701.2.1 / MA1701.2.11 / MA1701.2.12 / MA1701.2.15 / MA1701.2.17 / MA1701.2.2 / MA1701.2.20 / MA1701.2.4 / MA1701.2.5 MA1701.1.1 MA1701.1.10 MA1701.1.11 MA1701.1.12 MA1701.1.13 MA1701.1.14 MA1701.1.15 MA1701.1.16 MA1701.1.17 MA1701.1.18 MA1701.1.19 MA1701.1.2 MA1701.1.20 MA1701.1.3 MA1701.1.4 MA1701.1.5 MA1701.1.6 MA1701.1.7 MA1701.1.8 MA1701.1.9 MA1701.2.9 MA1701.2.10 / MA1701.2.6 MA1701.2.13 MA1701.2.14 / MA1701.2.7 MA1701.2.16 / MA1701.2.18 |
| Publications: | Hawkins MG, McGhee JD. elt-2, a second GATA factor from the nematode Caenorhabditis elegans. J Biol Chem 270:14666-71 (1995). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.